Background
Type: Article

Synthesis, characterization, crystal structure and HSA binding of two new N,O,O-donor Schiff-base ligands derived from dihydroxybenzaldehyde and tert-butylamine

Journal: Journal of Molecular Structure (00222860)Year: 5 September 2016Volume: 1119Issue: Pages: 373 - 384
Khosravi I. Hosseini F. Khorshidifard M.Sahihi M.Amiri Rudbari H.a
GreenDOI:10.1016/j.molstruc.2016.04.094Language: English

Abstract

Two new o-hydroxy Schiff-bases compounds, L1 and L2, were derived from the 1:1 M condensation of 2,3-dihydroxybenzaldehyde and 2,4-dihydroxybenzaldehyde with tert-butylamine and were characterized by elemental analysis, FT-IR, 1H and 13C NMR spectroscopies. The crystal structure of L2 was also determined by single crystal X-ray analysis. The crystal structure of L2 showed that the compound exists as a zwitterionic form in the solid state, with the H atom of the phenol group being transferred to the imine N atom. It adopts an E configuration about the central C=N double bond. Furthermore, binding of these Schiff base ligands to Human Serum Albumin (HSA) was investigated by fluorescence quenching, absorption spectroscopy, molecular docking and molecular dynamics (MD) simulation methods. The fluorescence emission of HSA was quenched by ligands. Also, suitable models were used to analyze the UV-vis absorption spectroscopy data for titration of HSA solution by various amounts of Schiff bases. The spectroscopic studies revealed that these Schiff bases formed 1:1 complex with HSA. Energy transfer mechanism of quenching was discussed and the values of 3.35 and 1.57 nm as the mean distances between the bound ligands and the HSA were calculated for L1 and L2, respectively. Molecular docking results indicated that the main active binding site for these Schiff bases ligands is in subdomain IB. Moreover, MD simulation results suggested that this Schiff base complex can interact with HSA, with a slight modification of its tertiary structure. © 2016 Elsevier B.V. All rights reserved.


Author Keywords

Crystal structureHSA bindingMolecular dockingMolecular dynamics simulationSchiff base ligands

Other Keywords

Absorption spectroscopyBinding energyBinsChelationCrystal atomic structureEnergy transferFluorescenceLigandsMolecular dynamicsMolecular modelingNuclear magnetic resonance spectroscopyQuenchingSingle crystalsSpectroscopic analysisSpectrum analysisUltraviolet spectroscopyX ray analysisEnergy transfer mechanismsFluorescence quenchingHSA bindingMolecular dockingMolecular dynamics simulationsSchiff-base ligandsSingle crystal X-ray analysisUV-Vis absorption spectroscopyCrystal structure