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Khajehpiri, M. ,
Saeidi, H. ,
La farge, C. ,
Ghahremaninejad, F. Kew Bulletin (1874933X) 79(3)pp. 641-652
In studying different taxonomic aspects of the tribe Echinophoreae Benth., the typification status of all species was reviewed. Among all members of this tribe, two species names had some issues in their type designations. These species names are typified here: Anisosciadium lanatum Boiss. and Pycnocycla ledermannii H.Wolff. In addition, distribution maps are presented for these two accepted names. © The Board of Trustees of the Royal Botanic Gardens, Kew 2024.
Vegetation Classification and Survey (26830671) 5pp. 329-346
Questions: The mountains of Fereydunshahr County are one of the centers of plant endemism within the Zagros, however, its flora and vegetation remain relatively understudied. In this study we undertook research on the plant species diversity of the subalpine and alpine zones of this area, their life forms, chorology, and vegetation types. Study area: Mountains of Fereydunshahr County, Central Zagros, West Iran. Methods: Plant specimens were collected during the growing seasons of 2018 to 2020. A complete species list was prepared including their life forms, chorotypes, elevation range, and major vegetation types. Results: A total of 308 vascular plant species have been identified belonging to 185 genera and 47 families. The largest plant families recorded during the study are Asteraceae with 44 species, Fabaceae 32, Brassicaceae 29, and Lamiaceae 27. At genus level Astragalus with 23 species is the richest. Hemicryptophyte with 162 (53%) species is the major life form. Most of the species are Irano-Turanian elements (52%). A total of 57 species (19%) are endemic to Iran and 23 species (7%) are endemic to Zagros. Most species belong to the montane-subalpine zone (33%), followed by subalpine (20%), montane (15%), lowland-montane (10%), alpine (9%), and lowland-subalpine (5%). In the alpine zone a high proportion of the species are endemic, while the montane zone has a very low proportion of endemics. From the identified species, 24% belong to subalpine and alpine thorn-cushion grasslands, 19% to montane steppe shrublands, 5% to subalpine tall-umbelliferous vegetation types, 5% to wetlands, and 5% to chasmophyte vegetation. Conclusions: The area has a rich flora, but at the same time is under high pressure from anthropogenic activities, especially a very high level of overgrazing. The region is not a protected area, therefore, establishment of a protected area and efficient conservation planning for the region is highly recommended. Copyright Mohsen Yaselyani et al.
Genetic Resources and Crop Evolution (09259864) 70(7)pp. 1999-2008
The genus Astragalus L. with about 3000 species is the largest genus of flowering plants. It is also the largest genus in the flora of Iran with more than 850 taxa. Astragalus cyclophyllon Beck is an endemic taxon belonging to Astragalus sect. Incani DC. It occurs scattered in the steppe and semi-steppe areas of the western and central parts of Iran. This species is one of the most important forage taxa of Astragalus. According to IUCN criteria it has been classified as a vulnerable taxon in Iran, as it occurs in habitats intensely used by herders for their livestock. Here we evaluate the genetic diversity of the populations of this species in Iran to see whether genetic diversity is high or if reductions have already happened. For this purpose, sampling was done in all geographical areas with A. cyclophyllon populations in Iran. In total, 80 individuals representing 29 populations were studied using 33 quantitative and qualitative morphological characters and 10 inter-simple sequence repeat (ISSR) primers. ISSR revealed 240 bands which all were polymorphic. Neighbor-joining cluster analysis divided the individuals in four groups, Principal Coordinate Analysis and Bayesian population assignment analysis in Structure resulted in three genetic units. Morphological variation showed no correlation with the molecular data. The mean of Gst and Nm indices are 0.516 and 0.468, respectively, which indicate a very high genetic differentiation and low gene flow between the studied populations. According to these results, we conclude that genetic diversity is high in this species and that, therefore, the major threat for A. cyclophyllon is currently not related to inbreeding depression in populations, but might be due to livestock grazing that could change the population demographic structure by reducing regular establishment of new offspring. © 2023, The Author(s).
Caryologia (00087114) 74(1)pp. 53-61
In this survey, the chromosome counts of eight Nepeta L. species were investigated and the karyotypic diversity among these species was studied. The examined species belong to N. cephalotes Boiss. species group, namely N. eremokosmos Rech.f., N. gloeocephala Rech. f., cephalotes Boiss., N. pungens (Bunge) Benth., N. ispahanica Boiss., N. mahanensis Jamzad & Simonds, N. hormozganica Jamzad and N. denudata Benth. collected from different habitats in Iran. The ploidy levels, karyotype formula, chromosome length range, total karyotype length, several karyotype asymmetries values and Stebbins classification were determined in this study. Results showed the same chromosome number, 2n = 2x= 18 for all studied species. The basic chromosome number for the above mentioned species are x = 9. Also, the smallest chromosome length is 1.02 μm in N. mahanensis. The largest chromosome length is 2.3 μm in N. ispahanica. The chromosomes of species were metacentric or submetacentric. According to the Stebbins classification, these species were located into three classes 1A, 2A and 3A. The chromosome numbers for six of studied species are reported here for the first time. © 2021 M. Hasaninejad, Z. Jamzad, S. Afsharzadeh, H. Saeidi.
Phytotaxa (11793163) 527(1)pp. 75-82
Iris pseudomeda is described and illustrated as a new species of Iris section Oncocyclus from Kurdistan province in northwestern Iran. It occurs among subalpine flora of Zagros mountain range, on stony calcareous hillsides and the brink of grassland fields. A complete morphological description, conservation status, botanical illustrations, notes on habitat and distribution range are presented for the new species. Furthermore, taxonomic relationships of I. pseudomeda with other members of this rhizomatous bearded section, particularly I. meda, are also discussed. © 2021 Magnolia Press.
Taxonomy and Biosystematics (23222190) 12(44)pp. 23-32
Two specimens of Vallisneria denseserrulata from the southeastern part of the Seimareh River in the Iranian province of Ilam were documented as new records for the flora of Iran. The maximum likelihood phylogenetic analyses of the specimens using DNA Sequence data from nuclear internal transcribed spacer (nrITS) and the plastid matK and trnK 5' intron gene regions revealed that the specimens are not conspecific with V. spiralis that has long been regarded to be the sole representative of the genus in Iran. Although their quite similar appearances do not preclude the possibility of the two siblings as being misidentified with each other, the fact that Vallisneria species are highly cultivated and traded commercially around the world, as well as its resolution within the clade containing the cultivated material of unknown provenance, left open the possibility of it being an escapee from cultivation which has established and naturalized in the region. © 2020, University of Isfahan.
Iranian Journal Of Botany (1029788X) 26(1)pp. 62-66
In the present study we report somatic chromosome numbers of four Nepeta species including: N. laxiflora (2n=18), N. depauperata (2n=34), N. archibaldii (2n=16) and N. dschuparensis (2n=18). These species are endemics of Iran and the chromosome number for these species are reported here for the first time. © 2020, Research Institute of Forests and Rangelands of Iran. All rights reserved.
Phytotaxa (11793163) 456(1)pp. 1-26
Multivariate morphometric approach (using PCA mix and CDA) and Inter-Simple Sequence Repeat Markers (ISSR) were used to characterize the patterns of morphological and genetic relationships of Capparis spinosa group in Iran. The morphological data analyses revealed that this complex could be divided into three main groups. C. spinosa subsp. cartilaginea and C. spinosa subsp. spinosa var. mucronifolia were reliably delineated by morphological data, but C. spinosa subsp. spinosa var. parviflora, C. spinosa subsp. spinosa var. herbacea, C. spinosa subsp. spinosa var. canescens, C. spinosa subsp. spinosa var. aegyptia and their intermediate phenotypes were overlapped. The results of ISSR data were different from morphological analyses and var. parviflora exhibited a close genetic affinity to var. mucronifolia rather than the other varieties of sub. spinosa. The results of this study revealed that subsp. cartilaginea should be recognized at species level. In case of var. parviflora, we propose subspecies level for this variety. Further investigation is needed to reveal the taxonomic status of var. mucronifolia. Copyright © 2020 Magnolia Press.
Chinese Physics B (16741056) 24
Kinesin is a microtubule-associated motor protein which can respond to the external electric field due to its polarity. Using a molecular dynamics simulation method, the effect of such a field on the affinity of kinesin to the αβ-tubulin is investigated in this study. To consider kinesin affinity, the system is exposed to an electric field of 0.03 V/nm with frequency values of 1, 2, ..., 9, and 10 GHz. It is found that the applied electric field can change kinesin affinity to the microtubule. These changes could perturb the normal operation of kinesin, such as the processive motility of kinesin on the microtubule. © 2015 Chinese Physical Society and IOP Publishing Ltd.
Journal Of Molecular Modeling (16102940) 20
The mechanical properties of the αβ-tubulin dimer of microtubules was modeled by using the molecular dynamics (MD) simulation method. The effect on the mechanical properties of the dimer of the existence and nonexistence of an applied electric field, either constant or periodic, was studied. Since there are charged or polar groups in the dimer structure, the electric field can interact with the dimer. The elastic constant and Young's modulus of the dimer were decreased when the dimer was exposed to a constant electric field of 0.03 V/nm. Furthermore, applying an oscillating electric field in the 1 GHz range to the dimer increased the elastic constant and Young's modulus of the dimer. These parameters were related to dimer rigidity and, consequently, in this frequency range, the application of electric fields may affect the function of microtubules. © Springer-Verlag 2014.
Bordbar, F. ,
Rahiminejad, M.R. ,
Saeidi, H. ,
Blattner, F.R. Plant Systematics and Evolution (16156110) 291(1)pp. 117-131
Cereal species of the grass tribe Triticeae are economically important and provide staple food for large parts of the human population. The Fertile Crescent of Southwest Asia harbors high genetic and morphological diversity of these species. In this study, we analyzed genetic diversity and phylogenetic relationships among D genome-bearing species of the wheat relatives of the genus Aegilops from Iran and adjacent areas using allelic diversity at 25 nuclear microsatellite loci, nuclear rDNA ITS, and chloroplast trnL-F sequences. Our analyses revealed high microsatellite diversity in Aegilops tauschii and the D genomes of Triticum aestivum and Ae. ventricosa, low genetic diversity in Ae. cylindrica, two different Ae. tauschii gene pools, and a close relationship among Ae. crassa, Ae. juvenalis, and Ae. vavilovii. In the latter species group, cloned sequences revealed high diversity at the ITS region, while in most other polyploids, homogenization of the ITS region towards one parental type seems to have taken place. The chloroplast genealogy of the trnL-F haplotypes showed close relationships within the D genome Aegilops species and T. aestivum, the presence of shared haplotypes in up to three species, and up to three different haplotypes within single species, and indicates chloroplast capture from an unidentified species in Ae. markgrafii. The ITS phylogeny revealed Triticum as monophyletic and Aegilops as monophyletic when Amblyopyrum muticum is included. © 2010 Springer-Verlag.
Genetic Resources and Crop Evolution (09259864) 57(3)pp. 415-422
Microsatellite markers were used to analyse the genetic diversity of 120 individuals of 20 weedy/wild populations of Secale cereale collected all around Iran. High levels of diversity, with an average number of seven alleles per locus (ranging up to 11) and high level polymorphism with polymorphism rate averaging 0.645 (between populations) and 0.364 (within populations) were observed. The Northwestern populations showed the highest and the Northern populations showed the lowest polymorphism and diversity. One population was notably more similar to five of the S. strictum used as outgroups. No taxon or geographic specific marker was detected, suggesting high gene flow between the populations, however some groupings which can be related to the subspecies, were evident. This survey showed the high genetic diversity within the Iranian rye genepool as an important source for crop breeders, and indicated that there is value in sampling for useful genes for crops improvement. © Springer Science+Business Media B.V. 2009.
Ehtemam, M.H. ,
Rahiminejad, M.R. ,
Saeidi, H. ,
Tabatabaei, B.E.S. ,
Krattinger, S.G. ,
Keller, B. International Journal Of Molecular Sciences (14220067) 11(11)pp. 4309-4325
The relationships among 55 wheat accessions (47 accessions collected from Iran and eight accessions provided by the Institute of Plant Biology of the University of Zurich, Switzerland) belonging to eight species carrying A genome (Triticum monococcum L., T. boeoticum Boiss., T. urartu Tumanian ex Gandilyan, T. durum Desf., T. turgidum L., T. dicoccum Schrank ex Schübler, T. dicoccoides (Körn. ex Asch. & Graebner) Schweinf. And T. aestivum L.) were evaluated using 31 A genome specific microsatellite markers. A high level of polymorphism was observed among the accessions studied (PIC = 0.77). The highest gene diversity was revealed among T. durum genotypes, while the lowest genetic variation was found in T. dicoccoides accessions. The analysis of molecular variance (AMOVA) showed a significant genetic variance (75.56%) among these accessions, representing a high intra-specific genetic diversity within Triticum taxa in Iran. However, such a variance was not observed among their ploidy levels. Based on the genetic similarity analysis, the accessions collected from Iran were divided into two main groups: diploids and polyploids. The genetic similarity among the diploid and polyploid species was 0.85 and 0.89 respectively. There were no significant differences in A genome diversity from different geographic regions. Based on the genetic diversity analyses, we consider there is value in a greater sampling of each species in Iran to discover useful genes for breeding purposes. © 2010 by the authors.
Jalilian, N. ,
Rahiminejad, M.R. ,
Saeidi, H. ,
Maassoumi, A.A. ,
Maroofi, H. Feddes Repertorium (1522239X) 121(1-2)pp. 81-84
Vicia kurdica Jalilian sp. nova, is described from Iran and presented in line drawing. It is compared with the morphologically close related V. lathyroides L., V. cuspidata BOISS. and V. sativa L. © 2010 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
Saeidi, H. ,
Tabatabaei, B.E.S. ,
Rahimmalek, M. ,
Talebi-badaf, M. ,
Rahiminejad, M.R. Genetic Resources and Crop Evolution (09259864) 55(8)pp. 1231-1238
The diploid goatgrass Aegilops tauschii is considered the D-genome donor of bread wheat and has probably a centre of diversity in north of Iran. In order to measure the genetic diversity of and the relationships among different populations, varieties and subspecies belonging to Ae. tauschii in Iran, DNA was extracted from 48 accessions of Ae. tauschii collected across the geographic range of the species in the Country and the genetic diversity was assessed using AFLPs based on eight PstI/MseI +3 primer pairs resulted in 277 bands, 198 of which were polymorphic. High level polymorphism was detected, with an average of polymorphism rate of 0.715; relatively low genetic similarity (0.455) between accessions and significant difference between the lowest (0.179) and the highest genetic similarity (0.817). The Iranian Ae. tauschii populations showed high level of genetic diversity. The populations studied were divided into two groups: one group was mainly representing Northern populations collected from Southern Caspian Sea shore and the other group was mainly representing Northeast and Northwest populations. Based on the results of this study, it can be suggested that Ae. tauschii possesses two separate gene-pools in Iran: Northern and Northeastern-Northwestern. Considering the needs for introducing new characteristics and alleles for wheat improvement purposes, Ae. tauschii Iranian gene-pool is assumed to be of high importance for more investigation in the future. © 2008 Springer Science+Business Media B.V.
Saeidi, H. ,
Rahiminejad, M.R. ,
Heslop-harrison j.s., Annals of Botany (03057364) 101(6)pp. 855-861
• Background and Aims: The diploid goat grass Aegilops tauschii (2n = 2x = 14) is native to the Middle East and is the D-genome donor to hexaploid bread wheat. The aim of this study was to measure the diversity of different subspecies and varieties of wild Ae. tauschii collected across the major areas where it grows in Iran and to examine patterns of diversity related to the taxa and geography. • Methods: Inter-retroelement amplified polymorphism (IRAP) markers were used to analyse the biodiversity of DNA from 57 accessions of Ae. tauschii from northern and central Iran, and two hexaploid wheats. • Key Results: Eight IRAP primer combinations amplified a total of 171 distinct DNA fragments between 180 and 3200 bp long from the accessions, of which 169 were polymorphic. On average, about eight fragments were amplified with each primer combination, with more bands being amplified from accessions from the north-west of the country than from other accessions. • Conclusions: The IRAP markers showed high levels of genetic diversity. Analysis of all accessions together did not allow the allocation of individuals to taxa based on morphology, but showed a tendency to put accessions from the north-west apart from others regions. It is speculated that this could be due to different activity of retroelements in the different regions. Within the two taxa with most accessions, there was a range of IRAP genotypes that could be correlated closely with geographical origin. This supports suggestions that the centre of origin of the species is towards the south-east of the Caspian Sea. IRAP is an appropriate marker system to evaluate genetic diversity and evolutionary relationships within the taxa, but it is too variable to define the taxa themselves, where more slowly evolving morphological, DNA sequence or chromosomal makers may be more appropriate. © The Author 2008. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved.
Genetic Resources and Crop Evolution (09259864) 53(7)pp. 1477-1484
Microsatellite markers were used to analyse the biodiversity of 57 accessions of different subspecies and varieties of wild Aegilops tauschii (2n = 2x = 14; D genome) collected across the major areas where it grows in Iran. Levels of diversity were high, with numbers of alleles averaging 7.3 (ranging up to 12) and polymorphism information contents averaging 0.6591. One accession was notably more similar to two of the D genome in hexaploid wheats (Triticum aestivum) used as outgroups. Within the Ae. tauschii accessions, no markers were characteristic for taxa or geographical origin, suggesting high gene flow between the subspecies and varieties, although some groupings, which could be related to geographical origin, were evident. This survey demonstrates the high diversity present in wild goatgrass in Iran, and indicates that there is value in sampling for useful genes for wheat breeding. © 2006 Springer Science+Business Media, Inc.
